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8P85

80S yeast ribosome in complex with Fluorolissoclimide

This is a non-PDB format compatible entry.
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 1 21 1
Unit cell lengths303.680, 287.580, 435.090
Unit cell angles90.00, 98.93, 90.00
Refinement procedure
Resolution207.600 - 2.900
R-factor0.2203
Rwork0.220
R-free0.22300
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.305
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]207.6003.000
High resolution limit [Å]2.9002.900
Rmerge0.090
Rmeas0.130
Rpim0.094
Number of reflections3210225229131
<I/σ(I)>25.40.8
Completeness [%]99.7
Redundancy12
CC(1/2)0.9940.120
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277.15ll lissoclimides/80S complexes were formed in 5.5 mM Tris-acetate at pH 7.0, 3 mM K(OAc) at pH 7.2, 5.5 mM NH4(OAc), 2 mM Mg(OAc)2, 1.3 mM DTT by incubation of 80S ribosomes (1.5 uM) with 30-fold molar excess of lissoclimide congeners for 15 min at 30 C. Crystals were grown at 4 C by hanging-drop vapor diffusion

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