8OHA
Crystal structure of Leptospira interrogans GAPDH
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALBA BEAMLINE XALOC |
Synchrotron site | ALBA |
Beamline | XALOC |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-05 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 |
Unit cell lengths | 79.804, 82.039, 123.182 |
Unit cell angles | 94.02, 95.15, 112.52 |
Refinement procedure
Resolution | 45.500 - 2.370 |
R-factor | 0.1916 |
Rwork | 0.191 |
R-free | 0.23400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.225 |
Data reduction software | XDS (20190315) |
Data scaling software | Aimless (0.7.4) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX ((1.21rc1_4903: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.500 | 2.455 |
High resolution limit [Å] | 2.370 | 2.370 |
Rmerge | 0.108 | 1.285 |
Rmeas | 0.126 | 1.498 |
Rpim | 0.065 | 0.765 |
Number of reflections | 110035 | 10363 |
<I/σ(I)> | 8.1 | |
Completeness [%] | 94.8 | 89.71 |
Redundancy | 3.6 | 3.7 |
CC(1/2) | 0.996 | 0.429 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Bis-Tris buffer, PEG 3350 |