8K2Z
Crystal structure of a human mascRNA A2G
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-06-19 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97852 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 79.365, 30.111, 89.353 |
Unit cell angles | 90.00, 105.73, 90.00 |
Refinement procedure
Resolution | 28.670 - 2.400 |
R-factor | 0.2775 |
Rwork | 0.277 |
R-free | 0.29220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.149 |
Data reduction software | xia2 |
Data scaling software | DIALS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 66.760 | 2.460 |
High resolution limit [Å] | 2.400 | 2.400 |
Rmerge | 0.095 | 0.783 |
Number of reflections | 16486 | 1215 |
<I/σ(I)> | 7.8 | 1.7 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.2 | |
CC(1/2) | 0.995 | 0.497 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 0.08 M Strontium chloride hexahydrate, 0.02 M Magnesium chloride hexahydrate, 18% v/v (+ / -)-2-Methyl-2,4-pentanediol, 0.012 M Spermine tetrahydrochloride |