Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8JV0

Crystal structure of the SLA-2*1001 allele and ASFV antigenic peptide at 2.2A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-04-20
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)0.987
Spacegroup nameP 21 21 21
Unit cell lengths41.944, 105.317, 221.350
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.030 - 2.200
R-factor0.22319
Rwork0.222
R-free0.24882
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.636
Data reduction softwareHKL-3000 (7.21)
Data scaling softwareHKL-3000 (7.21)
Phasing softwarePHASER (2.7.0)
Refinement softwareREFMAC (5.8.0258)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.970
High resolution limit [Å]1.9401.940
Rpim0.027
Number of reflections397593586
<I/σ(I)>60.25
Completeness [%]98.4
Redundancy9.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.2 M Lithium sulfate monohydrate,0.1 M TRIS hydrochloride pH 8.5,30% w/v Polyethylene glycol 4,000

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon