8JL5
Crystal structure of the Green fluorescent protein SEA227D variant at pH 4.5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 5C (4A) |
Synchrotron site | PAL/PLS |
Beamline | 5C (4A) |
Temperature [K] | 298 |
Detector technology | CCD |
Collection date | 2022-06-14 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.00000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 73.935, 82.947, 180.132 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.470 - 1.800 |
R-factor | 0.186 |
Rwork | 0.185 |
R-free | 0.22180 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.032 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 3.880 | 1.800 |
Rmerge | 0.140 | 0.086 | 0.461 |
Rmeas | 0.146 | 0.090 | 0.491 |
Rpim | 0.041 | 0.024 | 0.165 |
Total number of observations | 1136537 | ||
Number of reflections | 102810 | 10814 | 10037 |
<I/σ(I)> | 4.3 | ||
Completeness [%] | 99.2 | 99.6 | 98.3 |
Redundancy | 11.1 | 13.3 | 8 |
CC(1/2) | 0.992 | 0.997 | 0.628 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 298 | 0.1M Citric acid pH 4.5, 20% (w/v) PEG 6000 |