Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8JKS

T95R mutant IRF4 DNA-binding domain bound to an DNA containing GAGA motif

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2023-05-13
DetectorDECTRIS EIGER2 S 9M
Wavelength(s)0.9752
Spacegroup nameP 21 21 21
Unit cell lengths52.610, 68.010, 246.600
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.020 - 3.300
R-factor0.2376
Rwork0.235
R-free0.28690
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8jkl
RMSD bond length0.003
RMSD bond angle0.987
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.20.1_4487: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.0303.390
High resolution limit [Å]3.3003.300
Rmerge0.2511.382
Rmeas0.2621.437
Rpim0.0720.388
Total number of observations18017613384
Number of reflections13978981
<I/σ(I)>10.12.8
Completeness [%]99.7
Redundancy12.913.6
CC(1/2)0.9950.993
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M sodium citrate (pH 5.0) and 10% (w/v) PEG 6000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon