8JA5
Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-10-20 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9798 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 125.957, 125.957, 317.264 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.450 - 2.790 |
R-factor | 0.218 |
Rwork | 0.217 |
R-free | 0.24490 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6vy5 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.548 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.830 | 2.890 |
High resolution limit [Å] | 2.790 | 2.790 |
Rmerge | 0.104 | 0.104 |
Number of reflections | 63808 | 63465 |
<I/σ(I)> | 19.14 | |
Completeness [%] | 98.9 | |
Redundancy | 13.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 2.05M Ammonium sulfate, 10mM Barium chloride dihydrate, 0.1M Bis-Tris pH 5.5 |