8IOM
Crystal structure of the carboxy-terminal channel-forming domain of Colicin Ib
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSRRC BEAMLINE BL15A1 |
| Synchrotron site | NSRRC |
| Beamline | BL15A1 |
| Temperature [K] | 80 |
| Detector technology | CCD |
| Collection date | 2021-10-28 |
| Detector | RAYONIX MX300-HS |
| Wavelength(s) | 1 |
| Spacegroup name | I 41 |
| Unit cell lengths | 91.994, 91.994, 113.896 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 26.080 - 3.000 |
| R-factor | 0.1985 |
| Rwork | 0.196 |
| R-free | 0.21890 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.544 |
| Data scaling software | HKL-2000 |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 30.000 | 3.060 |
| High resolution limit [Å] | 2.940 | 2.940 |
| Rmerge | 0.090 | 0.556 |
| Rmeas | 0.101 | 0.627 |
| Rpim | 0.047 | 0.289 |
| Number of reflections | 11040 | 1107 |
| <I/σ(I)> | 9 | |
| Completeness [%] | 99.9 | 100 |
| Redundancy | 4.6 | 4.7 |
| CC(1/2) | 0.925 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293.5 | Precipitant: 0.1M sodium chloride, 0.1M sodium HEPES pH7.5, 12% w/v PEG 4000, 0.5 microliter 8mg/ml colicin Ib C domain mix with the same volume precipitant in the drop colicin Ib C domain buffer:20mM sodium, citrate pH5.2, 200mM NaCl |






