8IGW
Hexameric Ring Complex of Engineered V1-ATPase bound to 4 ADPs: A3(De)3_(ADP)3cat,1non-cat, Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP)3cat,2non-cat
This is a non-PDB format compatible entry.
Replaces: 7COSExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-12 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 179.407, 125.077, 180.914 |
Unit cell angles | 90.00, 93.83, 90.00 |
Refinement procedure
Resolution | 48.920 - 4.200 |
R-factor | 0.2439 |
Rwork | 0.242 |
R-free | 0.28110 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.651 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.920 | 4.320 |
High resolution limit [Å] | 4.200 | 4.200 |
Rmerge | 0.240 | 1.070 |
Rpim | 0.095 | 0.423 |
Number of reflections | 58670 | 4576 |
<I/σ(I)> | 7.2 | 2.1 |
Completeness [%] | 99.9 | |
Redundancy | 7.5 | |
CC(1/2) | 0.994 | 0.764 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1M Tris-HCl (pH 8.5), 20% PEG 3350, 0.2M Ammonium Acetate |