8IGV

Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat

This is a non-PDB format compatible entry.

Replaces:  7COR

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	PHOTON FACTORY BEAMLINE BL-1A
Synchrotron site	Photon Factory
Beamline	BL-1A
Temperature [K]	100
Detector technology	PIXEL
Collection date	2018-03-10
Detector	DECTRIS EIGER X 4M
Wavelength(s)	1.1
Spacegroup name	P 1 21 1
Unit cell lengths	119.667, 126.736, 123.649
Unit cell angles	90.00, 93.93, 90.00

Refinement procedure

Resolution	48.380 - 3.150
R-factor	0.214
Rwork	0.211
R-free	0.26810
Structure solution method	MOLECULAR REPLACEMENT
RMSD bond length	0.005
RMSD bond angle	0.939
Data reduction software	XDS
Data scaling software	Aimless
Phasing software	PHASER
Refinement software	PHENIX (1.18_3845)

Data quality characteristics

	Overall	Outer shell
Low resolution limit [Å]	48.380	3.230
High resolution limit [Å]	3.150	3.150
Rmerge	0.210	1.110
Rpim	0.087	0.490
Number of reflections	63835	4482
<I/σ(I)>	7.7	2
Completeness [%]	100.0
Redundancy	7.1
CC(1/2)	0.984	0.569

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP		293	0.1 M Tris-HCl (pH 8.5), 24% PEG 3350, 0.2 M Ammonium Acetate