8I2N
The RIPK1 kinase domain in complex with QY7-2B compound
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-07-06 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97918 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.510, 98.742, 128.129 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.300 - 2.290 |
R-factor | 0.2166 |
Rwork | 0.215 |
R-free | 0.24470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4itj |
RMSD bond length | 0.012 |
RMSD bond angle | 1.719 |
Data reduction software | autoPROC |
Data scaling software | autoPROC |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.210 | 2.410 |
High resolution limit [Å] | 2.290 | 2.290 |
Rmerge | 0.120 | 1.216 |
Number of reflections | 27550 | 3919 |
<I/σ(I)> | 14.9 | |
Completeness [%] | 100.0 | |
Redundancy | 12.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.9 | 289 | 0.2 M Sodium chloride, 0.1 M Tris pH 7.9, 23% w/v Polyethylene glycol 3350 |