Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8I1N

Crystal structure of APSK2 domain from human PAPSS2 in complex with endogenous APS and ADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-01-05
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9875
Spacegroup nameP 1 21 1
Unit cell lengths75.594, 71.329, 89.986
Unit cell angles90.00, 114.82, 90.00
Refinement procedure
Resolution44.190 - 2.800
R-factor0.2116
Rwork0.208
R-free0.28260
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2ofx
RMSD bond length0.011
RMSD bond angle1.400
Data reduction softwareDENZO
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.900
High resolution limit [Å]2.8006.0302.800
Rmerge0.9740.0980.854
Total number of observations132290
Number of reflections2131522072014
<I/σ(I)>3.8
Completeness [%]99.099.696.1
Redundancy6.26.54.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.2 M Ammonium citrate dihydrate, pH7.0 and 20% w/v PEG3350

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon