8HZK
A new fluorescent RNA aptamer bound with N, iridium hexammine soak
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL19U1 |
| Synchrotron site | SSRF |
| Beamline | BL19U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-05-05 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 1.102 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 74.893, 44.022, 58.304 |
| Unit cell angles | 90.00, 112.94, 90.00 |
Refinement procedure
| Resolution | 37.110 - 2.000 |
| R-factor | 0.2046 |
| Rwork | 0.203 |
| R-free | 0.23990 |
| Structure solution method | SAD |
| RMSD bond length | 0.006 |
| RMSD bond angle | 1.178 |
| Data reduction software | HKL-3000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.070 |
| High resolution limit [Å] | 2.000 | 4.310 | 2.000 |
| Rmerge | 0.125 | 0.106 | 0.245 |
| Rmeas | 0.149 | 0.128 | 0.291 |
| Rpim | 0.081 | 0.070 | 0.156 |
| Total number of observations | 77364 | ||
| Number of reflections | 11887 | 2259 | 2312 |
| <I/σ(I)> | 8 | ||
| Completeness [%] | 98.9 | 98.1 | 99.3 |
| Redundancy | 3.4 | 3.3 | 3.4 |
| CC(1/2) | 0.962 | 0.972 | 0.906 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 289 | 0.05 M magnesium chloride, 0.1 M HEPES pH 7.5, 30% polyethylene glycol monomethyl ether 550, 0.6% 1,6-diaminohexane |






