8HY5
Structure of D-amino acid oxidase mutant R38H
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | RRCAT INDUS-2 BEAMLINE PX-BL21 |
Synchrotron site | RRCAT INDUS-2 |
Beamline | PX-BL21 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-11-22 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97989 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 43.756, 74.164, 99.037 |
Unit cell angles | 90.00, 91.46, 90.00 |
Refinement procedure
Resolution | 34.960 - 2.100 |
R-factor | 0.2081 |
Rwork | 0.207 |
R-free | 0.23500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2du8 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.581 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.500 | 2.100 |
High resolution limit [Å] | 2.100 | 2.100 |
Number of reflections | 37081 | 2993 |
<I/σ(I)> | 13.4 | |
Completeness [%] | 100.0 | |
Redundancy | 7.5 | |
CC(1/2) | 0.999 | 0.760 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 291 | 26% PEG 2000 methyl ether, 0.1M Potassium Thiocyanate |