Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8HVJ

The structure of the E. coli mRNA endoonuclease YiCC

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-08-26
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.9792
Spacegroup nameP 21 21 2
Unit cell lengths134.208, 77.158, 102.596
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution102.596 - 4.050
Rwork0.321
R-free0.38470
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0352)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]102.6004.270
High resolution limit [Å]4.0504.050
Rmerge0.1350.630
Number of reflections91591309
<I/σ(I)>8.9
Completeness [%]99.9100
Redundancy8.67.5
CC(1/2)0.9960.821
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529524.5% PEG 3350, 0.15M Ammonium sulfate, 0.1M HEPES pH7.5, 5mM MgCl2

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon