8HOH
Crystal structure of Bcl-2 G101V in complex with sonrotoclax
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-03-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 32.479, 48.036, 106.418 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.780 - 1.900 |
R-factor | 0.2286 |
Rwork | 0.227 |
R-free | 0.25710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5vau |
RMSD bond length | 0.007 |
RMSD bond angle | 0.882 |
Data reduction software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.210 | 53.210 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.114 | 0.068 | 0.663 |
Rmeas | 0.119 | 0.072 | 0.691 |
Rpim | 0.034 | 0.024 | 0.193 |
Total number of observations | 168729 | 1492 | 11206 |
Number of reflections | 13776 | 164 | 873 |
<I/σ(I)> | 14.7 | 25.1 | 3.7 |
Completeness [%] | 99.7 | 98.9 | 99.9 |
Redundancy | 12.2 | 9.1 | 12.8 |
CC(1/2) | 0.998 | 0.998 | 0.945 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 0.2 M Sodium acetate trihydrate, 0.1 M Tris hydrochloride pH 8.5, 30% PEG 4000 |