8HIV
The structure of apo-SoBcmB with Fe(II) and AKG
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U1 |
Synchrotron site | SSRF |
Beamline | BL17U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-04-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 101.677, 101.677, 130.922 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.783 - 2.200 |
R-factor | 0.188791274986 |
Rwork | 0.187 |
R-free | 0.22110 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.937 |
Data reduction software | xia2 |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.030 | 2.270 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.111 | 0.942 |
Rmeas | 0.115 | 0.979 |
Rpim | 0.032 | 0.264 |
Number of reflections | 20954 | 1769 |
<I/σ(I)> | 17.2 | 5.1 |
Completeness [%] | 100.0 | 100 |
Redundancy | 12 | 13.8 |
CC(1/2) | 0.998 | 0.873 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 1M Potassium chloride, 0.1M HEPES pH 7, 1M Ammonium sulfate |