8HE9
Crystal structure of CTSB in complex with K777
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-08-10 |
Detector | DECTRIS EIGER2 XE 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 31.432, 70.497, 93.739 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.030 - 1.550 |
R-factor | 0.1809 |
Rwork | 0.179 |
R-free | 0.20200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6ay2 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.914 |
Data reduction software | XDS (2020-12-02) |
Data scaling software | XDS (2020-12-02) |
Phasing software | PHENIX (1.20.1-4487-000) |
Refinement software | PHENIX (1.20.1-4487-000) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 39.030 | 39.030 | 1.640 |
High resolution limit [Å] | 1.550 | 4.620 | 1.550 |
Rmerge | 0.057 | 0.025 | 0.870 |
Rmeas | 0.060 | 0.026 | 0.904 |
Number of reflections | 31146 | 1308 | 4925 |
<I/σ(I)> | 23.75 | ||
Completeness [%] | 99.9 | ||
Redundancy | 13.26 | ||
CC(1/2) | 1.000 | 1.000 | 0.955 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 17.1 % v/v Polyethylene glycol 600, 50 mM MES pH 5.6, 8.6 % w/v Polyethylene glycol 4,000 |