Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8HC0

Crystal structure of the extracellular domains of GPR110

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL10U2
Synchrotron siteSSRF
BeamlineBL10U2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9792
Spacegroup nameC 1 2 1
Unit cell lengths134.825, 47.993, 87.023
Unit cell angles90.00, 127.35, 90.00
Refinement procedure
Resolution19.800 - 2.900
R-factor0.2355
Rwork0.233
R-free0.29180
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)predicted by AlphaFold2
RMSD bond length0.005
RMSD bond angle0.579
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (phenix-1.19.2-4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.80043.8003.070
High resolution limit [Å]2.9008.5402.900
Rmerge0.1240.0490.579
Rmeas0.1490.0600.701
Number of reflections183904091555
<I/σ(I)>9.68
Completeness [%]98.0
Redundancy3.18
CC(1/2)0.9890.9950.732
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2890.2 M ammonium sulfate, 0.1 M sodium acetate trihydrate pH 4.6, 30% PEG-MME 2,000, 15% glycerol

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon