8H6P
Complex structure of CDK2/Cyclin E1 and a potent, selective macrocyclic inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-15 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 1 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 101.588, 101.588, 152.425 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.430 - 2.440 |
R-factor | 0.22207 |
Rwork | 0.221 |
R-free | 0.29240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1w98 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.626 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (v1.13-2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.430 | 2.527 |
High resolution limit [Å] | 2.440 | 2.440 |
Rmerge | 0.012 | 0.303 |
Rmeas | 0.017 | 0.429 |
Rpim | 0.012 | 0.303 |
Number of reflections | 30394 | 2967 |
<I/σ(I)> | 19.08 | 2.34 |
Completeness [%] | 99.8 | |
Redundancy | 2 | |
CC(1/2) | 1.000 | 0.832 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 0.2 M sodium citrate pH 6.5, 10% PEG3350 |