8GYA
Crystal structure of Alongshan virus methyltransferase bound to Sinefungin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-05-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97853 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 120.184, 120.184, 88.421 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.491 - 2.005 |
R-factor | 0.1994 |
Rwork | 0.198 |
R-free | 0.22590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8gy4 |
RMSD bond length | 0.008 |
RMSD bond angle | 1.127 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.124 | 0.891 |
Number of reflections | 43931 | 4311 |
<I/σ(I)> | 23.625 | |
Completeness [%] | 100.0 | |
Redundancy | 21.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 291 | 0.5M Lithium sulfate, 0.1M Tris pH 8.5, 25% w/v PEG 3350 |