8GJT
Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with TFH-I-116-D1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL9-2 |
| Synchrotron site | SSRL |
| Beamline | BL9-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-06-12 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.97946 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 64.670, 66.010, 87.830 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 52.770 - 3.500 |
| R-factor | 0.2563 |
| Rwork | 0.254 |
| R-free | 0.30660 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.004 |
| RMSD bond angle | 0.794 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.19.1_4122: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 52.770 | 3.690 |
| High resolution limit [Å] | 3.500 | 3.500 |
| Rpim | 0.147 | 0.729 |
| Number of reflections | 4021 | 601 |
| <I/σ(I)> | 2.8 | 0.6 |
| Completeness [%] | 80.6 | |
| Redundancy | 2.9 | 3 |
| CC(1/2) | 0.970 | 0.330 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 294 | 10% PEG 3350 5% PEG 400 0.1M HEPES pH 7.5 |






