8GFJ
Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni dose-response soaking with 1 mM concentration Z7285 inhibitor (no inhibitor binding observed)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRL BEAMLINE BL12-2 |
| Synchrotron site | SSRL |
| Beamline | BL12-2 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-12-02 |
| Detector | DECTRIS PILATUS 6M |
| Wavelength(s) | 0.9795 |
| Spacegroup name | I 2 3 |
| Unit cell lengths | 177.604, 177.604, 177.604 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 39.710 - 2.200 |
| R-factor | 0.18947 |
| Rwork | 0.188 |
| R-free | 0.21497 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6cf9 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.577 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | REFMAC (5.8.0349) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.710 | 2.270 |
| High resolution limit [Å] | 2.200 | 2.200 |
| Rmerge | 0.109 | 2.290 |
| Rmeas | 0.112 | 2.356 |
| Rpim | 0.026 | 0.549 |
| Total number of observations | 853505 | 73101 |
| Number of reflections | 47185 | 4031 |
| <I/σ(I)> | 20.6 | 1.5 |
| Completeness [%] | 99.9 | |
| Redundancy | 18.1 | 18.1 |
| CC(1/2) | 0.999 | 0.535 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 5.9 | 293 | 0.1 M sodium citrate pH 5.9 and 26% (v/v) PEG 600. Protein buffer was 10 mM HEPES pH 8.0, 200 mM ammonium acetate buffer |






