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8GD5

Crystal Structure of HIV-1 LM/HT Clade A/E CRF01 GP120 Core in Complex with DL-I-102

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-06-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97946
Spacegroup nameP 21 21 21
Unit cell lengths63.395, 66.792, 92.123
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.540 - 2.600
R-factor0.2213
Rwork0.219
R-free0.27420
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.360
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.19.1_4122: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.640
High resolution limit [Å]2.6002.600
Rmerge0.1540.983
Rpim0.0900.650
Number of reflections10748562
<I/σ(I)>17.31.1
Completeness [%]86.190.2
Redundancy3.73.1
CC(1/2)0.9400.600
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529410% PEG 3350 5% PEG 400 0.1 M HEPES pH 7.5

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