8GBF
Crystal structure of human DNA polymerase eta incorporating syn-ITP across dT
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 17-ID-2 |
| Synchrotron site | NSLS-II |
| Beamline | 17-ID-2 |
| Temperature [K] | 120 |
| Detector technology | PIXEL |
| Collection date | 2022-09-19 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.97934 |
| Spacegroup name | P 61 |
| Unit cell lengths | 99.297, 99.297, 81.609 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 49.650 - 2.110 |
| R-factor | 0.2073 |
| Rwork | 0.205 |
| R-free | 0.25680 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4o3n |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.057 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | MOLREP |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 85.900 | 2.150 |
| High resolution limit [Å] | 2.110 | 2.110 |
| Rpim | 0.052 | |
| Number of reflections | 25548 | 1501 |
| <I/σ(I)> | 10.1 | |
| Completeness [%] | 96.7 | 93.24 |
| Redundancy | 10.46 | 9.65 |
| CC(1/2) | 0.997 | 0.489 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MES, pH 6.25, 18% PEG2000 MME, 5 mM calcium chloride |






