8G83
Structure of NAD+ consuming protein Acinetobacter baumannii TIR domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-09-28 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.920072 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 44.200, 76.188, 97.330 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.860 - 3.030 |
R-factor | 0.2302 |
Rwork | 0.228 |
R-free | 0.27430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4lqc |
RMSD bond length | 0.006 |
RMSD bond angle | 0.788 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 28.860 | 3.139 |
High resolution limit [Å] | 3.030 | 3.031 |
Rmerge | 0.052 | 0.308 |
Rmeas | 0.074 | 0.435 |
Rpim | 0.052 | 0.308 |
Number of reflections | 6668 | 639 |
<I/σ(I)> | 10.06 | |
Completeness [%] | 98.0 | |
Redundancy | 2 | |
CC(1/2) | 0.997 | 0.793 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 295 | MIDAS 2-19: 20% v/v Jeffamine M-2070, 2% v/v dimethylsulfoxide |