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8FSI

The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to SAM

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-22
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.97910
Spacegroup nameP 21 21 21
Unit cell lengths46.405, 59.094, 83.545
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.770 - 1.460
R-factor0.1522
Rwork0.151
R-free0.17300
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.012
RMSD bond angle1.198
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.7701.512
High resolution limit [Å]1.4601.460
Rmerge0.0520.300
Rmeas0.0560.321
Rpim0.0190.110
Number of reflections393653661
<I/σ(I)>19.763.66
Completeness [%]96.991.96
Redundancy7.67.7
CC(1/2)0.9990.959
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP93004 uL of protein (10 mg/mL PFL-AE-CCR8 in 12.5 mM HEPES, 200 mM KCl, 3.5 mM SAM, 5.0 mM WT 7-mer PFL peptide, and 2.5 mM DTT) with 1 uL of crystallization reservoir solution (28% PEG 3350, 100 mM glycine, pH 9.0) in hanging drop format over 50 uL of crystallization reservoir solution

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PDB entries from 2024-05-15

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