8FSI
The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to SAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-22 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97910 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 46.405, 59.094, 83.545 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.770 - 1.460 |
R-factor | 0.1522 |
Rwork | 0.151 |
R-free | 0.17300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.198 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 41.770 | 1.512 |
High resolution limit [Å] | 1.460 | 1.460 |
Rmerge | 0.052 | 0.300 |
Rmeas | 0.056 | 0.321 |
Rpim | 0.019 | 0.110 |
Number of reflections | 39365 | 3661 |
<I/σ(I)> | 19.76 | 3.66 |
Completeness [%] | 96.9 | 91.96 |
Redundancy | 7.6 | 7.7 |
CC(1/2) | 0.999 | 0.959 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 300 | 4 uL of protein (10 mg/mL PFL-AE-CCR8 in 12.5 mM HEPES, 200 mM KCl, 3.5 mM SAM, 5.0 mM WT 7-mer PFL peptide, and 2.5 mM DTT) with 1 uL of crystallization reservoir solution (28% PEG 3350, 100 mM glycine, pH 9.0) in hanging drop format over 50 uL of crystallization reservoir solution |