8FR5
Crystal structure of the Human Smacovirus 1 Rep domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-09-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97910 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 31.160, 49.370, 31.380 |
Unit cell angles | 90.00, 110.30, 90.00 |
Refinement procedure
Resolution | 29.430 - 1.330 |
R-factor | 0.1909 |
Rwork | 0.187 |
R-free | 0.22410 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.768 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1_3660) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 29.430 | 1.378 |
High resolution limit [Å] | 1.330 | 1.330 |
Rmerge | 0.042 | 0.822 |
Rmeas | 0.049 | 0.969 |
Rpim | 0.025 | 0.504 |
Number of reflections | 19703 | 5923 |
<I/σ(I)> | 14.08 | 2.51 |
Completeness [%] | 95.5 | 82.91 |
Redundancy | 3.6 | 3.4 |
CC(1/2) | 0.997 | 0.757 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 0.1 M Sodium Acetate pH 5.0, 20% PEG 4000, 1 M Guanidine HCl |