8FOL
The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to SAM, alternate crystal form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-08-14 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.542 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.653, 59.011, 96.792 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.370 - 2.650 |
R-factor | 0.1957 |
Rwork | 0.195 |
R-free | 0.21420 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.786 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.370 | 2.745 |
High resolution limit [Å] | 2.650 | 2.650 |
Rmerge | 0.125 | 0.841 |
Rmeas | 0.142 | 0.954 |
Rpim | 0.066 | 0.441 |
Number of reflections | 8650 | 752 |
<I/σ(I)> | 10.26 | 1.29 |
Completeness [%] | 97.7 | 88.01 |
Redundancy | 4.3 | 4.2 |
CC(1/2) | 0.996 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 300 | 4 uL of protein (10 mg/mL PFL-AE-CCR8 in 12.5 mM HEPES, 200 mM KCl, with 3.65 mM SAM, 1.2 mM WT 7-mer PFL peptide, 0.13% glycerol, and 1 mM DTT) were combined with 1 uL of crystallization reservoir solution (18% PEG 3350, 100 mM HEPES, pH 7.5) in hanging drop format over 50 uL of crystallization reservoir solution. |