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8FOL

The structure of a crystallizable variant of E. coli pyruvate formate-lyase activating enzyme bound to SAM, alternate crystal form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2016-08-14
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.542
Spacegroup nameP 21 21 21
Unit cell lengths49.653, 59.011, 96.792
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution35.370 - 2.650
R-factor0.1957
Rwork0.195
R-free0.21420
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.786
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]35.3702.745
High resolution limit [Å]2.6502.650
Rmerge0.1250.841
Rmeas0.1420.954
Rpim0.0660.441
Number of reflections8650752
<I/σ(I)>10.261.29
Completeness [%]97.788.01
Redundancy4.34.2
CC(1/2)0.9960.710
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.53004 uL of protein (10 mg/mL PFL-AE-CCR8 in 12.5 mM HEPES, 200 mM KCl, with 3.65 mM SAM, 1.2 mM WT 7-mer PFL peptide, 0.13% glycerol, and 1 mM DTT) were combined with 1 uL of crystallization reservoir solution (18% PEG 3350, 100 mM HEPES, pH 7.5) in hanging drop format over 50 uL of crystallization reservoir solution.

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PDB entries from 2024-05-15

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