8FAV
HUMAN RETENOID-RELATED ORPHAN RECEPTOR-GAMMA (RORC2) LIGAND-BINDING DOMAIN IN COMPLEX WITH COMPOUND 5 ANDINDAZOLE ACID BOUND IN H12-POCKET
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-11-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.088, 96.922, 56.914 |
Unit cell angles | 90.00, 91.26, 90.00 |
Refinement procedure
Resolution | 56.900 - 1.850 |
R-factor | 0.19414 |
Rwork | 0.192 |
R-free | 0.23260 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | RORG5_IA_DIMER_P21.PDB |
RMSD bond length | 0.022 |
RMSD bond angle | 0.704 |
Data reduction software | XDS |
Data scaling software | Aimless |
Refinement software | REFMAC (v5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 96.920 | 2.070 |
High resolution limit [Å] | 1.850 | 1.850 |
Rmerge | 0.076 | 0.440 |
Rmeas | 0.092 | 0.523 |
Rpim | 0.050 | 0.279 |
Total number of observations | 142166 | 41020 |
Number of reflections | 42348 | 11991 |
<I/σ(I)> | 11 | 3 |
Completeness [%] | 97.2 | |
Redundancy | 3.4 | 3.4 |
CC(1/2) | 0.989 | 0.837 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 100 mM MES pH 5.9, 5 mM ammonium sulfate, 300 mM magnesium chloride, 10% N,N-dimethylformamide, and 14% PEG-MME-5000 |