8F7M
Crystal Structure of HLA-B*57:01-TW10-T242N complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-06-11 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95372 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.942, 82.174, 110.833 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.950 - 1.880 |
R-factor | 0.1744 |
Rwork | 0.172 |
R-free | 0.22010 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.066 |
Data reduction software | XDS |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.290 | 1.920 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.177 | 1.232 |
Rmeas | 0.190 | 1.319 |
Rpim | 0.069 | 0.468 |
Total number of observations | 293231 | 19225 |
Number of reflections | 38624 | 2428 |
<I/σ(I)> | 10.2 | 3.1 |
Completeness [%] | 99.9 | |
Redundancy | 7.6 | 7.9 |
CC(1/2) | 0.994 | 0.712 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 293 | 20 % w/v PEG4000, 0.2 M ammonium acetate, 0.1 M sodium cacodylate |