8EWT
Bile salt hydrolase A from Lactobacillus gasseri bound to covalent probe
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-29 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 108.440, 108.440, 161.518 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.220 - 2.030 |
R-factor | 0.1872 |
Rwork | 0.186 |
R-free | 0.22640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7svf |
RMSD bond length | 0.007 |
RMSD bond angle | 0.827 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.220 | 2.103 |
High resolution limit [Å] | 2.030 | 2.030 |
Rmerge | 0.213 | 1.811 |
Rmeas | 0.230 | 2.044 |
Rpim | 0.084 | 0.908 |
Number of reflections | 62279 | 5470 |
<I/σ(I)> | 6.08 | 0.6 |
Completeness [%] | 96.9 | 88.3 |
Redundancy | 6.2 | 4.2 |
CC(1/2) | 0.986 | 0.146 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 10% (w/v) PEG 4000, 20% (v/v) isopropanol. Protein was incubated with probe and then concentrated to 7.08 mg/mL. Protein crystallized in a 1:2 protein:crystallant ratio. |