8ESF
Crystal structure of human Nischarin PX and LRR domains with engineered mutations
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-13 |
Detector | DECTRIS EIGER2 X 16M |
Wavelength(s) | 0.9537 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 88.173, 83.307, 90.830 |
Unit cell angles | 90.00, 94.36, 90.00 |
Refinement procedure
Resolution | 43.960 - 2.560 |
R-factor | 0.2167 |
Rwork | 0.215 |
R-free | 0.24290 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | AlphaFold2 model |
RMSD bond length | 0.010 |
RMSD bond angle | 1.349 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20rc3_4406) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 49.120 | 2.650 |
High resolution limit [Å] | 2.560 | 2.560 |
Rpim | 0.032 | |
Number of reflections | 42220 | 4092 |
<I/σ(I)> | 11.3 | |
Completeness [%] | 99.1 | |
Redundancy | 6.9 | |
CC(1/2) | 0.999 | 0.672 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 293 | 0.1 M imidazole, 10% PEG-8000, 0.1 M sodium fluoride |