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8EN0

Structure of GII.17 norovirus in complex with Nanobody 7

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPETRA III, EMBL c/o DESY BEAMLINE P14 (MX2)
Synchrotron sitePETRA III, EMBL c/o DESY
BeamlineP14 (MX2)
Temperature [K]100
Detector technologyPIXEL
Collection date2020-10-19
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9762
Spacegroup nameI 2 2 2
Unit cell lengths74.820, 85.459, 223.853
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution70.960 - 2.990
R-factor0.2521
Rwork0.249
R-free0.30600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5f4o
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]111.926111.9263.170
High resolution limit [Å]2.9908.9402.990
Rmerge0.2860.0541.859
Rmeas0.2980.0571.934
Total number of observations188769
Number of reflections142806302314
<I/σ(I)>9.133.921.31
Completeness [%]95.599.597.9
Redundancy13.21912.1613.34
CC(1/2)0.9940.9940.566
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP291.150.8 M ammonium sulfate and 0.1M citric acid [pH 4]

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