8E87
Human DNA polymerase eta-DNA-rA-ended primer-dGMPNPP ternary mismatch complex with Mg2+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-03-18 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.978720 |
Spacegroup name | P 61 |
Unit cell lengths | 97.728, 97.728, 81.881 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.320 - 2.190 |
R-factor | 0.2021 |
Rwork | 0.200 |
R-free | 0.24880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7m7l |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.320 | 42.320 | 2.320 |
High resolution limit [Å] | 2.190 | 6.490 | 2.190 |
Rmerge | 0.037 | 0.027 | 0.153 |
Rmeas | 0.041 | 0.030 | 0.198 |
Total number of observations | 213299 | ||
Number of reflections | 44645 | 1724 | 6764 |
<I/σ(I)> | 24.84 | 53.44 | 4.64 |
Completeness [%] | 98.6 | 99.7 | 92 |
Redundancy | 4.778 | 5.686 | 2.128 |
CC(1/2) | 0.999 | 0.999 | 0.958 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 2000MME, 0.1 M MES |