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8E0X

DAHP (3-deoxy-D-arabinoheptulosonate-7-phosphate) Synthase complexed with Mn(II), PEP, and Pi in unbound:(bound)2:other Conformations

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X25
Synchrotron siteNSLS
BeamlineX25
Temperature [K]100
Detector technologyPIXEL
Collection date2011-02-24
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.1
Spacegroup nameC 1 2 1
Unit cell lengths210.717, 53.181, 150.366
Unit cell angles90.00, 115.80, 90.00
Refinement procedure
Resolution43.480 - 1.970
R-factor0.1882
Rwork0.188
R-free0.21410
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5cks
RMSD bond length0.008
RMSD bond angle1.055
Data reduction softwareautoPROC (1.0.5)
Data scaling softwareautoPROC (1.0.5)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]67.6502.050
High resolution limit [Å]1.9701.970
Rmerge0.0500.420
Rmeas0.0580.492
Rpim0.0300.254
Number of reflections1053765157
<I/σ(I)>17.73.2
Completeness [%]99.899.9
Redundancy3.6
CC(1/2)0.9990.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62770.1 M trilithium citrate tetrahydrate, 10% (w/v) PEG 3350, 5 mM DAHP oxime, 5 mM phosphoenolpyruvate, 5 mM erythrose 4-pohsphate, 30% (v/v) ethylene glycol, 1:1:0.2

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PDB entries from 2024-05-15

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