8DWR
Crystal structure of the L333V variant of catalase-peroxidase from Mycobacterium tuberculosis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-06-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 82.671, 150.817, 127.037 |
Unit cell angles | 90.00, 90.45, 90.00 |
Refinement procedure
Resolution | 19.992 - 2.100 |
R-factor | 0.1813 |
Rwork | 0.181 |
R-free | 0.22650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2cca |
RMSD bond length | 0.003 |
RMSD bond angle | 0.594 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 2.140 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.094 | 0.546 |
Number of reflections | 178934 | 8861 |
<I/σ(I)> | 9.6 | 3.3 |
Completeness [%] | 98.9 | 99.3 |
Redundancy | 7 | 7.4 |
CC(1/2) | 0.990 | 0.800 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 10 % w/v PEG 6000 100 mM HEPES / Sodium Hydroxide; pH 7.0 |