8DV3
Crystal structure of human CD1b presenting Phosphatidylinositol C34:1
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
| Synchrotron site | Australian Synchrotron |
| Beamline | MX1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-10-13 |
| Detector | DECTRIS EIGER X 9M |
| Wavelength(s) | 0.9753 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 57.816, 78.628, 92.725 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 46.580 - 1.900 |
| R-factor | 0.1935 |
| Rwork | 0.192 |
| R-free | 0.25340 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 5wl1 |
| RMSD bond length | 0.008 |
| RMSD bond angle | 0.899 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 46.580 | 1.970 |
| High resolution limit [Å] | 1.900 | 1.900 |
| Rpim | 0.062 | 0.635 |
| Number of reflections | 33822 | 3316 |
| <I/σ(I)> | 13.5 | 2.1 |
| Completeness [%] | 99.3 | 98.66 |
| Redundancy | 14.7 | 14.7 |
| CC(1/2) | 0.990 | 0.730 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 24% PEG 3350, 0.2M Sodium Iodide, 2% ethylene glycol |






