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8DSE

Human NAMPT in complex with substrate NAM and activator quercitrin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2019-06-22
DetectorRAYONIX MX-300
Wavelength(s)0.9787
Spacegroup nameP 1 21 1
Unit cell lengths60.865, 106.786, 82.689
Unit cell angles90.00, 96.61, 90.00
Refinement procedure
Resolution19.858 - 1.428
R-factor0.1658
Rwork0.165
R-free0.18350
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2e5d
Data reduction softwareXDS
Data scaling softwareAimless (0.7.4)
Phasing softwareMOLREP
Refinement softwarePHENIX (1.16_3549)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.86019.8601.450
High resolution limit [Å]1.4287.8201.430
Rmerge0.0810.0420.454
Rmeas0.0950.0490.632
Rpim0.0490.0260.438
Total number of observations413211890
Number of reflections19091311536809
<I/σ(I)>7.716.41.1
Completeness [%]98.593.870.8
Redundancy3.53.61.7
CC(1/2)0.9960.9950.672
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.52900.1 M Tris-HCl, pH 8.5, 0.2 M NaCl, 20% glycerol and 13-18% PEG 3350

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