8DQ6
Structure of A. thaliana MIF/D-DT-like protein-1 (MDL1)
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SLS BEAMLINE X10SA |
| Synchrotron site | SLS |
| Beamline | X10SA |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2020-10-16 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 0.9999 |
| Spacegroup name | P 65 |
| Unit cell lengths | 66.737, 66.737, 132.320 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 43.530 - 1.560 |
| R-factor | 0.1833 |
| Rwork | 0.182 |
| R-free | 0.20700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 7kqx |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.824 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.18_3845: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 43.530 | 1.620 |
| High resolution limit [Å] | 1.560 | 1.560 |
| Rmerge | 0.052 | 0.990 |
| Rmeas | 0.054 | |
| Rpim | 0.012 | 0.236 |
| Number of reflections | 46283 | 4257 |
| <I/σ(I)> | 31.45 | |
| Completeness [%] | 97.5 | 90.4 |
| Redundancy | 20 | |
| CC(1/2) | 1.000 | 0.878 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 293 | 50 mM Tris, pH 8.0, 0.2 M calcium acetate, 26% PEG8000, 30% ethylene glycol |






