8DOV
Crystal structure of the Shr Hemoglobin Interacting Domain 2 (HID2) in complex with Hemoglobin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-07-18 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9792 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 216.760, 116.450, 70.880 |
Unit cell angles | 90.00, 96.90, 90.00 |
Refinement procedure
Resolution | 62.430 - 2.100 |
R-factor | 0.2174 |
Rwork | 0.215 |
R-free | 0.23850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6DKQ 1IRD |
RMSD bond length | 0.008 |
RMSD bond angle | 0.860 |
Data reduction software | XDS (BUILT=20170615) |
Data scaling software | XSCALE |
Phasing software | PHASER (2.7.17) |
Refinement software | BUSTER (2.10.4 (20-OCT-2021)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.430 | 62.430 | 2.150 |
High resolution limit [Å] | 2.100 | 9.380 | 2.100 |
Rmerge | 0.043 | 0.029 | 0.765 |
Rmeas | 0.052 | 0.035 | 0.913 |
Total number of observations | 320616 | ||
Number of reflections | 98797 | 1127 | 7028 |
<I/σ(I)> | 13.38 | 33.55 | 1.59 |
Completeness [%] | 96.8 | 93.8 | 92.8 |
Redundancy | 3.245 | 3.441 | 3.287 |
CC(1/2) | 0.998 | 0.998 | 0.562 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 295 | 11% PEG-6000, 100mM sodium acetate, 240mM lithium chloride |