8DIO
Crystal structure of LARP1-DM15 from Danio rerio bound to m7GpppC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-16 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97931 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.950, 59.702, 60.381 |
Unit cell angles | 90.00, 100.31, 90.00 |
Refinement procedure
Resolution | 47.180 - 2.300 |
R-factor | 0.2123 |
Rwork | 0.207 |
R-free | 0.26010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5v87 |
RMSD bond length | 0.012 |
RMSD bond angle | 1.292 |
Data reduction software | AutoProcess |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.180 | 2.382 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.015 | |
Number of reflections | 13814 | 1391 |
<I/σ(I)> | 28.43 | |
Completeness [%] | 91.8 | 93.8 |
Redundancy | 2 | 2 |
CC(1/2) | 0.999 | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 295 | 50 mM HEPES, pH 7, 0 or 100 mM NaCl, 2 mM DTT |