8D88
Structure of Y430F D-ornithine/D-lysine decarboxylase complex with D-lysine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2021-03-19 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.0000 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 141.240, 50.490, 139.320 |
| Unit cell angles | 90.00, 117.26, 90.00 |
Refinement procedure
| Resolution | 41.280 - 1.410 |
| R-factor | 0.1752 |
| Rwork | 0.175 |
| R-free | 0.19460 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 6N2H.pdb |
| Data reduction software | autoPROC |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 41.280 | 1.460 |
| High resolution limit [Å] | 1.410 | 1.410 |
| Number of reflections | 161759 | 12439 |
| <I/σ(I)> | 10.63 | |
| Completeness [%] | 95.7 | |
| Redundancy | 5.7 | |
| CC(1/2) | 0.999 | 0.430 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 H HEPES-K, pH 7.5, 0.2 M NaOAc, 20% PEG 4000 |






