Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8D6F

Crystal Structure of Human Myt1 Kinase domain Bounded with Eph receptor inhibitor / compound 41

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2017-10-21
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.979100
Spacegroup nameP 1 21 1
Unit cell lengths50.748, 112.047, 72.506
Unit cell angles90.00, 110.21, 90.00
Refinement procedure
Resolution68.040 - 2.490
R-factor0.216
Rwork0.215
R-free0.23950
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3p1a
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]68.04068.0402.640
High resolution limit [Å]2.4907.4502.490
Rmerge0.0530.0400.532
Rmeas0.0750.0560.752
Total number of observations91995
Number of reflections26430345013020
<I/σ(I)>6.0814.110.71
Completeness [%]82.087.876.9
Redundancy1.0661.0191.086
CC(1/2)0.9960.9940.618
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.252935.6 to 6.6% PEG3350, 0.2 M Na2SO4, 0.1 M Tris-HCl and 10% EG

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon