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8D5E

The complex of Gtf2b Peptide TGAASFDEF Presented by H2-Dd

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyPIXEL
Collection date2019-04-02
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths53.750, 80.590, 100.020
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.391 - 2.460
Rwork0.199
R-free0.24160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5kd7
RMSD bond length0.006
RMSD bond angle1.417
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0350)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]47.39147.3502.560
High resolution limit [Å]2.4608.8702.460
Rmerge0.1900.0770.813
Rmeas0.2080.0840.895
Rpim0.0840.0340.368
Total number of observations230410352
Number of reflections163464011801
<I/σ(I)>10.727.22.7
Completeness [%]99.999.799.5
Redundancy65.75.7
CC(1/2)0.9880.9900.782
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP309.1515% w/v PEG1500

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PDB entries from 2024-05-15

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