8CI7
Apo-crystal structure of a wild-type South African HIV-1 subtype C protease at 2.4 angstrom
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SEALED TUBE |
| Source details | BRUKER IMUS 3.0 MICROFOCUS |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-10-26 |
| Detector | Bruker PHOTON III |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 41 21 2 |
| Unit cell lengths | 46.600, 46.600, 102.144 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 22.390 - 2.400 |
| R-factor | 0.2059 |
| Rwork | 0.203 |
| R-free | 0.22100 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.563 |
| Data reduction software | SAINT |
| Data scaling software | SADABS |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 22.390 | 2.490 |
| High resolution limit [Å] | 2.400 | 2.400 |
| Rmerge | 0.138 | |
| Rmeas | 0.175 | |
| Rpim | 0.106 | |
| Number of reflections | 4659 | 433 |
| <I/σ(I)> | 9.7 | |
| Completeness [%] | 97.2 | |
| Redundancy | 4.5 | |
| CC(1/2) | 0.991 | 0.462 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 5 mg/mL of wild-type South African HIV-1 subtype C protease in 10 mM of sodium acetate at pH 5 with the crystallization condition consisting of 0.1 M of bis-Tris at pH 6.5 and 3.0 M of NaCl |






