8CI3
Structure of bovine CD46 ectodomain (SCR 1-2)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-25 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.976 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 91.090, 91.090, 121.123 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 72.800 - 2.330 |
R-factor | 0.2283 |
Rwork | 0.227 |
R-free | 0.25570 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.009 |
RMSD bond angle | 0.890 |
Data scaling software | DIALS |
Phasing software | PHASER (1.18.2_3874) |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.800 | 2.413 |
High resolution limit [Å] | 2.330 | 2.330 |
Rmerge | 0.234 | 3.599 |
Rmeas | 0.238 | 3.671 |
Rpim | 0.047 | 0.718 |
Number of reflections | 22417 | 2168 |
<I/σ(I)> | 10.19 | 1.12 |
Completeness [%] | 99.4 | 99.45 |
Redundancy | 25.4 | 25.8 |
CC(1/2) | 0.998 | 0.736 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.1M Tris pH8.5, 20% PEG 8000, 0.2M MgCl2 |