8CB0
Crystal structure of dehydrogenase domain of Cylindrospermum stagnale NADPH-Oxidase 5 (NOX5) in complex with M41 and NADP+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-10-01 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.967700 |
Spacegroup name | P 3 2 1 |
Unit cell lengths | 128.683, 128.683, 72.106 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 72.210 - 2.500 |
R-factor | 0.21346 |
Rwork | 0.213 |
R-free | 0.22795 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 8cak |
RMSD bond length | 0.013 |
RMSD bond angle | 1.968 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASES |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 72.210 | 2.600 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.172 | 2.676 |
Rmeas | 0.177 | 2.742 |
Rpim | 0.039 | 0.592 |
Total number of observations | 57425 | |
Number of reflections | 24102 | 2693 |
<I/σ(I)> | 17.5 | 1.5 |
Completeness [%] | 99.9 | |
Redundancy | 20.5 | 21.3 |
CC(1/2) | 0.999 | 0.526 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8 | 293 | 0.3 M diethylene glycol; 0.3 M triethylene glycol, 0.3 M tetraethylene glycol, 0.3 M pentaethylene glycol, Tris-HCl 0.1 M pH 8.0, 20% (v/v) ethylene glycol, 10% (w/v) PEG8000 |