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8C7O

Unliganded transcriptional pleiotropic repressor CodY from Staphylococcus aureus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2022-05-07
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.9762
Spacegroup nameP 1 21 1
Unit cell lengths35.803, 163.852, 46.868
Unit cell angles90.00, 93.80, 90.00
Refinement procedure
Resolution45.000 - 2.050
Rwork0.213
R-free0.25600
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX (1.17.1_3660)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.7602.120
High resolution limit [Å]2.0502.050
Rpim0.0740.799
Number of reflections334293376
<I/σ(I)>5.61
Completeness [%]99.4100
Redundancy3.83.9
CC(1/2)0.9950.440
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8291Protein, 270 microM in 20 mM Tris-Cl pH 8, 200 mM NaCl, 1 mM DTT Well, 200 mM ammoniumsulphate, 100 mM NaAc pH4.6, 22-25% PEG4000

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PDB entries from 2025-06-11

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