8C5B
Crystal Structure of Penicillin-binding Protein 3 (PBP3) from Staphylococcus Epidermidis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P13 (MX1) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P13 (MX1) |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-06-24 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 83.442, 83.442, 307.155 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 57.940 - 2.500 |
R-factor | 0.2229 |
Rwork | 0.221 |
R-free | 0.25650 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.049 |
Data reduction software | XDS |
Data scaling software | STARANISO |
Phasing software | PHENIX |
Refinement software | PHENIX (v1.19.2-4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.687 | 2.297 |
High resolution limit [Å] | 2.067 | 2.067 |
Number of reflections | 46353 | 2318 |
<I/σ(I)> | 16.8 | |
Completeness [%] | 95.2 | |
Redundancy | 18.8 | |
CC(1/2) | 0.999 | 0.996 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | Ammonium sulfate |